Convert mzmine feature table to mass_dataset class.
convet_mzmine2mass_dataset(x, rt_unit = c("minute", "second"))Feature table from mzmine.
RT unit (minute or second) in feature table.
A mass_dataset-class object.
data("mzmine_table")
head(mzmine_table[,1:3])
#> row ID row m/z row retention time
#> 1 1 108.51790 10.24505
#> 2 2 184.98560 10.24529
#> 3 3 99.51304 10.24432
#> 4 4 176.97199 10.45647
#> 5 6 186.95641 10.47076
#> 6 7 108.51790 12.79046
object =
convet_mzmine2mass_dataset(x = mzmine_table)
object
#> --------------------
#> massdataset version: 1.0.12
#> --------------------
#> 1.expression_data:[ 3443 x 22 data.frame]
#> 2.sample_info:[ 22 x 2 data.frame]
#> 3.variable_info:[ 3443 x 3 data.frame]
#> 4.sample_info_note:[ 2 x 2 data.frame]
#> 5.variable_info_note:[ 3 x 2 data.frame]
#> 6.ms2_data:[ 0 variables x 0 MS2 spectra]
#> --------------------
#> Processing information (extract_process_info())
#> 1 processings in total
#> create_mass_dataset ----------
#> Package Function.used Time
#> 1 massdataset convet_mzmine2mass_dataset() 2022-08-07 19:33:02